Insertion junction: CLIP2.033755_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.033755
Chromosome:chromosome 17
Location:1454129
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g706550 (1 of 752) IPR027417 - P-loop containing nucleoside triphosphate hydrolase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGCTGTACGCGCTACCGCAGTCGGTGCTGCGGTACGGGTGTGTGCTCA
Internal bar code:GCGTCGGAGAGAAGCCATTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:920
LEAP-Seq percent confirming:95.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GACTCGAGTTTGGTTCCCGT
Suggested primer 2:CCTTAAAGATCGCAGCACGC