Insertion junction: CLIP2.033778_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.033778
Chromosome:chromosome 12
Location:9833556
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g546452 GT90F45,GT90-45 (1 of 52) PF05686 - Glycosyl transferase family 90 (Glyco_transf_90); GT90 family protein 45 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTACATCAACGTAAAGGAGGAAGATCCCTCCCCGCCGCCCACCCCGCCA
Internal bar code:GGGTTTATGTGGTACAATTTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2870
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:61
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:ACGTCCGCACTGAAAGATGT
Suggested primer 2:TTGTACGCACGTGCCAAATG