Insertion junction: CLIP2.033783_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.033783
Chromosome:chromosome 5
Location:1222741
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g800528 (1 of 1) K11251//K13849 - histone H2A (H2A) // reticulocyte-binding protein (RBP) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACACGCAGCCCCACCATAGTCCAGTACCAACGCGTCATGCTGCTGCATG
Internal bar code:TTCGGGCAAGTCCAGATATCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1361
LEAP-Seq percent confirming:95.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GGGTCACACATGAAGGAGGG
Suggested primer 2:AGCAAGAGGAGGAGGAGGAG