Insertion junction: CLIP2.033790_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.033790
Chromosome:chromosome 16
Location:1489920
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g652900 (1 of 89) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCTACTGATAGGAAAACAGCATGTCAGACTGCTGTCACACTTATTGCT
Internal bar code:CCGGTTTGCAGAGGACTTTCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:496
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCCTGGCCTGATATGTAC
Suggested primer 2:GGTACGGCGAGATCAGCTAC