Insertion junction: CLIP2.033808_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.033808
Chromosome:chromosome 2
Location:3295565
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g097550 (1 of 1) PTHR12532:SF0 - TRANSCRIPTIONAL REGULATORY PROTEIN HAH1-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCTGAAGGCGGGCGGCGGCGGTTGTTGGGTGGGAGCAAGGGGCCCAAG
Internal bar code:TCAAATTTCCTGTATATTTACC

Confirmation - LEAP-Seq

LEAP-Seq distance:218
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:ATCATCCAGCTGTGAGTGCC
Suggested primer 2:GCTCTCCTCCACGCTCATTT