Insertion junction: CLIP2.033831_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.033831
Chromosome:chromosome 10
Location:6045437
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g461750 DMC5 Putative DNA methylase; (1 of 1) PF00145//PF12047 - C-5 cytosine-specific DNA methylase (DNA_methylase) // Cytosine specific DNA methyltransferase replication foci domain (DNMT1-RFD) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTAAAACCACCACCACCACCACCACCCCCCGCCCACCAACCGGTCCGATA
Internal bar code:TAAGGACACTATGTTTATAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2247
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TACGGTGGAGGAAGAGGAGG
Suggested primer 2:GTGCCTCTGCTTGTTGTGTG