Insertion junction: CLIP2.033832_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.033832
Chromosome:chromosome 10
Location:1342498
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g427600 KTNA1,KAT1,PF19 Katanin catalytic subunit, 60 kDa; (1 of 2) PTHR23074:SF19 - KATANIN P60 ATPASE-CONTAINING SUBUNIT A1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGAGCGGGGATTACTCCGCGGGGTGCACGTACTATGAGAACGCCGTGG
Internal bar code:GCTGCTGGTTCGTTTCTTGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1648
LEAP-Seq percent confirming:57.1429
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:GTATTCAACGCGTACGCCAC
Suggested primer 2:CATCTGAGAGCTGGCGAGAG