Insertion junction: CLIP2.033837_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.033837
Chromosome:chromosome 6
Location:5438241
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g285850 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCATCCACACAGTGATCGCCACATAGTTCTCCACCATTTCCTTTGAGATC
Internal bar code:TACGATTGGGCCTACTTATGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:610
LEAP-Seq percent confirming:15.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GACTTGGGATGTGGGGTAGC
Suggested primer 2:GTCTTCCAGGTCGACATGCA