Insertion junction: CLIP2.033838_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.033838
Chromosome:chromosome 7
Location:1039897
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g319701 (1 of 1) PTHR10071//PTHR10071:SF184 - TRANSCRIPTION FACTOR GATA GATA BINDING FACTOR // GATA TRANSCRIPTION FACTOR 10-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCATAATATGCAAATACACCAACCATTTTCCAGCGGCACATGGCGAACAG
Internal bar code:GAGTTTCAAATCACGAATCCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2052
LEAP-Seq percent confirming:95.3125
LEAP-Seq n confirming:61
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:64

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTCTTTCAACGCGGTCCT
Suggested primer 2:GTCTCCTCTTCGTTGCAGCT