Insertion junction: CLIP2.033841_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.033841
Chromosome:chromosome 11
Location:4084171
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g481050 (1 of 10) PF00505 - HMG (high mobility group) box (HMG_box); High mobility group protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCCGACTGACTGGCACCGCACCCGACTGGTTGGCGCCGCACCCGACTG
Internal bar code:TACGTTGATTTTCCCTAGCTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2560
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCCTTCTTCACCTCCACC
Suggested primer 2:CTCCTGTCCTCGCTCGTAAC