Insertion junction: CLIP2.033843_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.033843
Chromosome:chromosome 17
Location:5257781
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g802106 (1 of 32) IPR029062 - Class I glutamine amidotransferase-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGAAGTCACGGTACGACAACCGAAGACAACGAGCTGCATACCAGTGAC
Internal bar code:GAGCTCCTTTACTAACAGGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2443
LEAP-Seq percent confirming:83.871
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:TCGTTTAAGCACGCCTTCCT
Suggested primer 2:AAGCGGTTGAGGTCGGTTAG