Insertion junction: CLIP2.033851_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.033851
Chromosome:chromosome 2
Location:3169041
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g096601 (1 of 1) IPR001440//IPR013026//IPR019734 - Tetratricopeptide repeat 1 // Tetratricopeptide repeat-containing domain // Tetratricopeptide repeat CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGGGGCTGAAGCTGTACGGCGACGCGCGCGAGGCCTACGAGCGAGCGA
Internal bar code:ATATGGGATGTTTATTTTACAT

Confirmation - LEAP-Seq

LEAP-Seq distance:166
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTTCTTGGGAGCAGCGAT
Suggested primer 2:TTCGGTAGGGTAGGGAAGGG