Insertion junction: CLIP2.033856_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.033856
Chromosome:chromosome 6
Location:8386245
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g307850 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTGTGTGCAGATACCAGCCCAAGTGTGGGGGATATTGGTGGGGGGGTG
Internal bar code:CCATACGGGTACGGTCTCGCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1217
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGGTCAGTGATGAGCGTG
Suggested primer 2:GGGAGGCGTGATCGTTAGAG