Insertion junction: CLIP2.033862_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.033862
Chromosome:chromosome 9
Location:171915
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g386735 DLA1 Dihydrolipoamide acetyltransferase; (1 of 1) PTHR23151//PTHR23151:SF9 - DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED // DIHYDROLIPOYLLYSINE-RESIDUE ACETYLTRANSFERASE COMPONENT OF PYRUVATE DEHYDROGENASE COMPLEX, MITOCHONDRIAL intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAACAAACACCAACCTGAGTCATCGTGGGCGACAGCGACGGCATGTTGAG
Internal bar code:AGGCCTTACGATGGAGCTGCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:5684
LEAP-Seq percent confirming:79.1045
LEAP-Seq n confirming:53
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:67

Suggested primers for confirmation by PCR

Suggested primer 1:CCGCCATAGCACGAATAGGT
Suggested primer 2:GTACGGTATGCAGGGTCGAG