Insertion junction: CLIP2.033867_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.033867
Chromosome:chromosome 10
Location:427978
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g420650 (1 of 24) IPR001680//IPR017986//IPR020472 - WD40 repeat // WD40-repeat-containing domain // G-protein beta WD-40 repeat intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCCATTCTAACCCGCCCTTCACCCCCCGTCCCATAAGTATTGTCGCATC
Internal bar code:TAGTTTCGAATGCGAATGGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:498
LEAP-Seq percent confirming:4.7619
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:100
LEAP-Seq n unique pos:105

Suggested primers for confirmation by PCR

Suggested primer 1:CGAGATGACCCTGCTGCTAG
Suggested primer 2:CGGTGGATTGGGTGTGATGA