Insertion junction: CLIP2.033877_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.033877
Chromosome:chromosome 7
Location:6458881
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre40.g760147 (1 of 1) PTHR10877//PTHR10891 - POLYCYSTIN-RELATED // EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTTAAGGCCTTTCCAGTAACACGTGGATAATGTAGAACCTTCCCACACG
Internal bar code:AAATCGGTTAGAGGCGTGTCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:798
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:AATCTAACTGCCACTGCGCT
Suggested primer 2:GCCTTCAAGCGCTTTGACAA