Insertion junction: CLIP2.033887_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.033887
Chromosome:chromosome 6
Location:1701741
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g262500 (1 of 41) PTHR32523//PTHR32523:SF8 - FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGGCTGACCTGTTGATGGATGTCGTGGAGTCAATTGGGGTAGTGTGGGA
Internal bar code:ACGCGGAGGCTCGTTCGTGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1422
LEAP-Seq percent confirming:54.8387
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:AGGGACCTTGGCACATCATG
Suggested primer 2:TCTGGGTTATGCCGGGAAAC