Insertion junction: CLIP2.033888_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.033888
Chromosome:chromosome 9
Location:6759832
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g417250 ELG27 Exostosin-like glycosyltransferase 27; (1 of 34) 2.4.2.41 - Xylogalacturonan beta-1,3-xylosyltransferase / Xylogalacturonan xylosyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAAAGCATGGCATTGCACCCACCGTGCTTGTAGACATACAGACTCTGCAA
Internal bar code:GGCTATCTCCTTGCCTTAGGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:2835
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:TACACTGTCTCTGCGCGTTT
Suggested primer 2:TACCTTGCCGGGTGTGTAAC