Insertion junction: CLIP2.033889_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.033889
Chromosome:chromosome 9
Location:3007044
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g393543 HCP2 (1 of 4) 1.7.99.1 - Hydroxylamine reductase / Hydroxylamine (acceptor) reductase; Hybrid-cluster protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCGCTCAGCCCCTTTACCCTTTACCCTTCCCCCTTACCTTCTTCCCTC
Internal bar code:GTATGAGCTGGGGGGCTGTGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1339
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:ATATGCGCACACACCCTTCA
Suggested primer 2:GGTCAGCGCATATGCTCTCT