Insertion junction: CLIP2.033892_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.033892
Chromosome:chromosome 11
Location:2075347
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467756 MMP5 Metalloproteinase of VMP family; (1 of 51) PF05548 - Gametolysin peptidase M11 (Peptidase_M11) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCATGGGGACGGGGGAAAGGGAGAGGCCGCCGTGGATCATGCATGCAGA
Internal bar code:ACAAGGGACGGCAATTCAACTC

Confirmation - LEAP-Seq

LEAP-Seq distance:778
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TTCCCCTTCCCCATCCATCT
Suggested primer 2:ACCAGCCCAAACTGAACCAA