Insertion junction: CLIP2.033896_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.033896
Chromosome:chromosome 13
Location:3420394
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g586916 SCL27,SRS6,SRS9 Serine/arginine-rich pre-mRNA splicing factor; (1 of 2) K12900 - FUS-interacting serine-arginine-rich protein 1 (FUSIP1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGGGTAAGCCATGGGTGCATGCAACCATTGGCGCCACCCAGCACCCTG
Internal bar code:GCGACTCCCCGCTGAGTCACCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2095
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GTGACATGCTTATGCCGCAG
Suggested primer 2:CTGAGCTAGGGTAGGTGGGT