Insertion junction: CLIP2.033905_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.033905
Chromosome:chromosome 6
Location:1251199
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g258700 PYC1 (1 of 1) 6.4.1.1 - Pyruvate carboxylase / Pyruvic carboxylase; Pyruvate carboxylase 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCATTGGTAATGGGGACACCCCACAGCAGCGGCGATGGGGCCCACGCACC
Internal bar code:ACATTATCTCTCACCGCCAGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1085
LEAP-Seq percent confirming:78.5714
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:ATCAAGTACAAGGCGGTGGG
Suggested primer 2:ACCGCCATCCGTAACAATGT