Insertion junction: CLIP2.033907_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.033907
Chromosome:chromosome 17
Location:4198816
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g729350 (1 of 22) PTHR11017//PTHR11017:SF145 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATTGTGTTTGCCGGCAGGCATGTGCTGTCGGCGGATCCCAAGCCGCAGG
Internal bar code:TGTGCTCAAGGGGTAATACTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1734
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGCAGTGATGCGTTATGG
Suggested primer 2:TGTCACAATTGCAGTGCGTG