Insertion junction: CLIP2.033922_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.033922
Chromosome:chromosome 16
Location:1102047
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g649700 (1 of 4) 2.1.1.127 - [Ribulose-bisphosphate carboxylase]-lysine N-methyltransferase / RuBisCO methyltransferase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCATCACGGGTAGGGGCAGGGGGGTAGGGTGTTGCAACAAGCATACGCC
Internal bar code:GTAGCCGGTAGAGATAGGGACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1341
LEAP-Seq percent confirming:95.1219
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:AAGTTAGCCCCTGACCTTGC
Suggested primer 2:GGGTCACTCGACGTCAACTT