Insertion junction: CLIP2.033925_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.033925
Chromosome:chromosome 12
Location:3232881
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g499700 MFT3,MAE3 (1 of 11) K03327 - multidrug resistance protein, MATE family (TC.MATE, SLC47A, norM, mdtK, dinF); MATE efflux family protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCGACAGGGTACCACGTCATGTGCGGTCTGGCGTCCGCGTCTGAGACC
Internal bar code:TTGTCGAAATCTAATGAATCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2826
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CCACGCAGTCAAACACCATG
Suggested primer 2:AAGGACGTGCGCAAGTAAGA