Insertion junction: CLIP2.033937_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.033937
Chromosome:chromosome 12
Location:458563
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g801344 (1 of 5) PTHR19446:SF107 - INTRON MATURASE, TYPE II FAMILY PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGGCCAAGAATGCAGCCATCATGGAAAGTTGGATTCGGCTGCAGGGTA
Internal bar code:AATCTAGGCTGCTAAGGAGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1183
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:AGTTCGGGTCTTTAGCTGGC
Suggested primer 2:GAGGGCTAGCGCTAAGACAG