Insertion junction: CLIP2.033940_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.033940
Chromosome:chromosome 6
Location:6118510
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g291350 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAAGGCACCGTGTGGATGAGGGGGCGCATGCAACCGCGTGCATGCACA
Internal bar code:ACAGGCTAAGGGGGGACAAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1620
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CTCAAAGTGCTCGCTCTGGA
Suggested primer 2:CACAAGGACTTGGTGCAACG