Insertion junction: CLIP2.033944_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.033944
Chromosome:chromosome 3
Location:4074680
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g172150 (1 of 1) PTHR10663//PTHR10663:SF182 - GUANYL-NUCLEOTIDE EXCHANGE FACTOR // SH2 DOMAIN-CONTAINING PROTEIN 5 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCTGGTCTCATGGGCCTGGAGGAGATGTGCGAGGCCGCGGTGGCGGCG
Internal bar code:TGTAATGGTAGGGGGGGACCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1717
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGCTGCTAATGAACGACG
Suggested primer 2:CTTCGTAGCCATGACCTCCC