Insertion junction: CLIP2.033946_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.033946
Chromosome:chromosome 2
Location:7680250
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00136852

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGAAACAGAAGCACTGATTGTGTGTGTGCCTGTGTGCAAAACAACAACA
Internal bar code:AGTTGATTCATATGGAATAATA

Confirmation - LEAP-Seq

LEAP-Seq distance:4679
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:ACAACTGTCTGGACGAGCAG
Suggested primer 2:GTGGCCGCATCATCATGAAC