Insertion junction: CLIP2.033948_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.033948
Chromosome:chromosome 10
Location:1338687
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g427600 KTNA1,KAT1,PF19 Katanin catalytic subunit, 60 kDa; (1 of 2) PTHR23074:SF19 - KATANIN P60 ATPASE-CONTAINING SUBUNIT A1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCATCCGGAGCTCAGCGAACTTGCAGCACCTATTGTACGTTTTGCAGCAG
Internal bar code:GGGAGGTATTATACCTACAAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:982
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CCAACTTCCCCTGGGACATC
Suggested primer 2:TATACCCTCGCCCTCAAGCT