Insertion junction: CLIP2.033949_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.033949
Chromosome:chromosome 3
Location:6138928
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g190650 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCACCTCCTTGCCCGACTGCTTGGCCTGCGTCCGCGTAGACTGGACCC
Internal bar code:CCAGCTAATATGCGACCTATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3316
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTTGCACTCAAGCGTTCG
Suggested primer 2:CTATGAGGAAGAGGGCGCAG