Insertion junction: CLIP2.033953_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.033953
Chromosome:chromosome 10
Location:278025
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g419550 (1 of 1) PTHR28141//PTHR28141:SF1 - FAMILY NOT NAMED // 2',3'-CYCLIC-NUCLEOTIDE 3'-PHOSPHODIESTERASE CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCGTTCCTCCCGCCTGCTCCCGCTGCCGTGCCCTACGCCGCGACATGCA
Internal bar code:AGGTGGAAAAAACTGTTTGACT

Confirmation - LEAP-Seq

LEAP-Seq distance:5202
LEAP-Seq percent confirming:72.2892
LEAP-Seq n confirming:60
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:83

Suggested primers for confirmation by PCR

Suggested primer 1:AGACATTGCACAAACGTGGC
Suggested primer 2:CACGTATGCATGGTGCTTCG