Insertion junction: CLIP2.033957_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.033957
Chromosome:chromosome 7
Location:5230423
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g349152 (1 of 2) IPR000104//IPR011598 - Antifreeze protein, type I // Myc-type, basic helix-loop-helix (bHLH) domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAGCACCTGCAGCACCTGCACCTGCAGCAGCAGCAGGCGCTGCACCAGA
Internal bar code:GGCGACACATAAGAGAGCCCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:778
LEAP-Seq percent confirming:85.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:TGCAGCTAGCTCAAGTCACC
Suggested primer 2:CACACCGCCAGTTGTTGAAG