Insertion junction: CLIP2.033959_4

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.033959
Chromosome:chromosome 12
Location:5577198
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g531000 AMT1H,AMT8 Ammonium transporter; (1 of 8) K03320 - ammonium transporter, Amt family (amt, AMT, MEP) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGAGGGCCAGAGCGTGGCAGGTGCTTGCCTGTTGGAACAAAACATGCTG
Internal bar code:CGCTCAAACAACGGGCTCTTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3016
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:CTTTCTCCACCCCATCCCAC
Suggested primer 2:CTGTGTGTGTGCTGCAACTC