Insertion junction: CLIP2.033961_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.033961
Chromosome:chromosome 12
Location:4978800
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g524900 (1 of 8) IPR001810//IPR006553 - F-box domain // Leucine-rich repeat, cysteine-containing subtype intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGGCATGGCGACAAATGGTGGTGACCCCTGACTGGGCGACTATCGCAA
Internal bar code:TCCTCACATACGGGTATCCCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2015
LEAP-Seq percent confirming:46.6667
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:32
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:ATTGACGGAGCTGCAAGTGA
Suggested primer 2:TTTACACGCCTGGGATTGCT