Insertion junction: CLIP2.033970_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.033970
Chromosome:chromosome 3
Location:1789556
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g153950 TRP12 Transient receptor potential ion channel protein; (1 of 6) PTHR10117 - TRANSIENT RECEPTOR POTENTIAL CHANNEL intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGACTCGCTCACACGTGCGTCCTTACCTGCTTGCGTCCACATCTGTGCG
Internal bar code:GTTTTTTCGTACCGCGGTTCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:6653
LEAP-Seq percent confirming:96.6667
LEAP-Seq n confirming:58
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:GATGATGTTGAAGCCGTCGC
Suggested primer 2:CAGGTTGCTTCGGTTGTGTG