Insertion junction: CLIP2.033978_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.033978
Chromosome:chromosome 6
Location:8315025
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g307250 (1 of 1) PTHR18937//PTHR18937:SF240 - STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGAGGCGGCGCTGTCCGACCACAAGCGTGAGCTGGCGTCCAAGGCGCAC
Internal bar code:AAAAGTGAGCGCGAGGCAGAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1218
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GGGTCCATCAAACAGACGGT
Suggested primer 2:AATGAGGTTGGGCATGCGTA