Insertion junction: CLIP2.033987_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.033987
Chromosome:chromosome 14
Location:3413874
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g630050 (1 of 6) PTHR13339//PTHR13339:SF0 - COP9 SIGNALOSOME COMPLEX SUBUNIT 8 // COP9 SIGNALOSOME COMPLEX SUBUNIT 8 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGGCGCAAGAAGTCAGGAGGCAAGTGGCTGTAAATTGTATGGTCGCTT
Internal bar code:GGGTAGCGAAAGCCTTTTCATT

Confirmation - LEAP-Seq

LEAP-Seq distance:2195
LEAP-Seq percent confirming:61.1111
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCAACGGCATGCATACCT
Suggested primer 2:AACTGCTGCTGCCACCTTAT