Insertion junction: CLIP2.033988_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.033988
Chromosome:chromosome 17
Location:2009229
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g710700 (1 of 4) PTHR23257:SF490 - DUAL SPECIFICITY PROTEIN KINASE SHKE CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGGCTGGGTTCTGTCGGGGCGGGTGGTGAAGAGGGCGCGTCGGGGATG
Internal bar code:AAGTCTAAACAATGTTTTTCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2834
LEAP-Seq percent confirming:90.2439
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:TATTGGAGGGTGCTGCTGTG
Suggested primer 2:GGGTCGACAGCAGTGATGAT