| Insertion cassette: | CIB2 |
| Side of cassette: | 3' |
| Strand: | - |
| Strain: | CLIP2.033991 |
| Chromosome: | chromosome 5 |
| Location: | 1217555 |
| Confidence (%): | 80 |
| Locus systematic id | Locus common name | Defline | Feature |
|---|---|---|---|
| Cre05.g241633 | (1 of 2) IPR006626//IPR011050//IPR012334 - Parallel beta-helix repeat // Pectin lyase fold/virulence factor // Pectin lyase fold | intron | |
| lncRNA_TCONS_00245550 | intron |
Insertion site details | |
| Expected flanking sequence (starting at cassette; orientation from cassette outwards): | AGCGACACAAGAAAACAATCAGCACAGAGAAAAAGACGCAAAGCTTCCTG |
| Internal bar code: | TAGATGAGAGTATAATTCAAGC |
Confirmation - LEAP-Seq | |
| LEAP-Seq distance: | 5111 |
| LEAP-Seq percent confirming: | 100.0 |
| LEAP-Seq n confirming: | 48 |
| LEAP-Seq n nonconfirming: | 0 |
| LEAP-Seq n unique pos: | 48 |
Suggested primers for confirmation by PCR | |
| Suggested primer 1: | ATGCGGTCTGGTGAGGAATG |
| Suggested primer 2: | CCGCTCGTTTTCGTTGGTTT |