Insertion junction: CLIP2.033997_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.033997
Chromosome:chromosome 7
Location:5499875
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g351300 (1 of 2) PTHR11451//PTHR11451:SF41 - TRNA SYNTHETASE-RELATED // GLUTAMATE--TRNA LIGASE, MITOCHONDRIAL-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCATGCCTTCGCCCCCGCACGTTCCCTTGTCCCCCTGCCTCGACAACAGG
Internal bar code:CTCAGTGCGGGGGGAACGGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1192
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTTCATCCTATCCGCCTC
Suggested primer 2:TGTCTGCCATGTCCAAGGAC