Insertion junction: CLIP2.033999_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.033999
Chromosome:chromosome 6
Location:7722772
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g302700 (1 of 1) PF00560//PF13516 - Leucine Rich Repeat (LRR_1) // Leucine Rich repeat (LRR_6) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACGGCGCTGGGCAGCACCTGCGTGTGCGTGCGTGTGTGCGAGGCCCATG
Internal bar code:CCTGTAGACTAGACACGGGCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1128
LEAP-Seq percent confirming:77.7778
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GGGGGAGAAAGAGTCAGTGC
Suggested primer 2:GGATAACGTCGCGCAAAGAC