Insertion junction: CLIP2.034002_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.034002
Chromosome:chromosome 3
Location:225508
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g144264 (1 of 40) PTHR23257//PTHR23257:SF513 - SERINE-THREONINE PROTEIN KINASE // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCCGGATGCGGCTCAGACCAAAGTCCTGCGGGCAGCAGGTGCACAACGA
Internal bar code:TTCGTAGACAGCACAGAGGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1725
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:GACAAGCTCATCTACGGGGG
Suggested primer 2:CACACACGAGTACACGACCA