Insertion junction: CLIP2.034007_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.034007
Chromosome:chromosome 12
Location:9023455
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g544850 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGGGGACCACGTCGGCGATCGGGGGCATGGGGGCAGACCTGGAGGGCG
Internal bar code:GTAGGCAGTTCTTTGGGTTCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1390
LEAP-Seq percent confirming:86.3636
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GTGAAGTGTGCCTCTACCCC
Suggested primer 2:GGGGAGGATGTGACCTTGTG