Insertion junction: CLIP2.034010_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.034010
Chromosome:chromosome 3
Location:5106496
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g180550 FPN2,NTD5 (1 of 3) K01081 - 5'-nucleotidase (E3.1.3.5); Flagellar Associated 5'-nucleotidase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGTCGCCACTGCTGCCGCTGCGCCCACCTGTGCCATGTACTCCTTCAC
Internal bar code:ATTATCCATCAGCGGATTCAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:5613
LEAP-Seq percent confirming:42.6667
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:43
LEAP-Seq n unique pos:75

Suggested primers for confirmation by PCR

Suggested primer 1:CGAGAAGATGGACGAGGTGG
Suggested primer 2:ACCCTCAGTGTCCAGCATTG