Insertion junction: CLIP2.034012_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.034012
Chromosome:chromosome 6
Location:2780529
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g271450 (1 of 31) IPR003590 - Leucine-rich repeat, ribonuclease inhibitor subtype intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGTCGTCGCCTTGGTGTGTCGTGCGCAAGCTCATGCCACTGTTCCCCG
Internal bar code:TATGCCGCGAGACCCGATCATT

Confirmation - LEAP-Seq

LEAP-Seq distance:244
LEAP-Seq percent confirming:7.14286
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:TGGACAATGTACCAAGCCCC
Suggested primer 2:GGCTTCACCTCGGCAGTAAT