Insertion junction: CLIP2.034013_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.034013
Chromosome:chromosome 12
Location:9098911
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g544200 CYN20D,CYN20-4,CYN13 (1 of 2) PTHR11071//PTHR11071:SF263 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE // MOCA-CYP, ISOFORM A; Cyclophilin 13 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAATGACAAGTGGGAAGGCGGAGAGGGACCGCCATAAGACGTCAGGGT
Internal bar code:GTTACGGGCTGTAGACGACCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:327
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CAGTCTGACGCCCCGTTAAT
Suggested primer 2:CCTACAGGTGCTTTCTGGGG