Insertion junction: CLIP2.034018_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.034018
Chromosome:chromosome 8
Location:1634787
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g365825 (1 of 1) 1.14.99.42 - Zeaxanthin 7,8-dioxygenase / Zeaxanthin 7,8(7',8')-cleavage dioxygenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAATGGAGGTCAAGTATGCTTTAAAGAGCCTGACATAATTTATTTAAGC
Internal bar code:AATTAGCTACGGAGAACGTTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:960
LEAP-Seq percent confirming:81.8182
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGCCAAATCCGCACTGTG
Suggested primer 2:AAGGCAATGAGGAGCAGTCC