Insertion junction: CLIP2.034024_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.034024
Chromosome:chromosome 6
Location:5298517
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g284650 MKP6 (1 of 1) PTHR23339//PTHR23339:SF71 - TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE // SUBFAMILY NOT NAMED; Dual-specificity protein phosphatase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGCGCAAGAGCCGAGCGAAACGGCCCCAACACCGCGCCATCCGCCCGC
Internal bar code:ATAGCTACTGAATATACTTTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:258
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:ACAGCTTTCGGGATGAGTGG
Suggested primer 2:GGCAGGAACTTGTCGAGTGA