Insertion junction: CLIP2.034027_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.034027
Chromosome:chromosome 16
Location:1826588
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g655400 (1 of 1) K17985 - activating molecule in BECN1-regulated autophagy protein 1 (AMBRA1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCACCTGTACACCTCCACCACGCTGTGCACCGCCGCCAGCTGCTCCGCAC
Internal bar code:ATACGGGATTCTGATCTATTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1492
LEAP-Seq percent confirming:54.5455
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GGTCCCTTCTACGAGCTGTG
Suggested primer 2:CGTTGAATACCGCCACGTTC